个人简介
长聘教授, 2026年获得国家级海外人才项目，湖北省BR人才项目资助。师从欧洲科学院院士、国际知名有机地球化学家Jaap Sinninghe Damsté教授。主要研究地质微生物演化及其与气候环境关系，开发了生物有机地球化学领域的非靶向脂质组学技术，在揭示地质微生物—环境互作方面取得重要进展。作为核心成员参与欧盟ERC-Microlipids等国际重大合作项目，在PNAS、Nature Communications、ISME J等国际专业期刊以第一或通讯作者发表多篇论文，被评价为“推动脂质组学进入新时代”。感兴趣的方向：微生物与环境互作机制，微生物在生物地球化学循环过程中扮演的角色，以及通过古今对比，研究地质微生物的演化及其与气候环境的关系。
已发表论文 (第一作者及通讯作者*)
1. Ding, S. *, Bale, N.J., Cutmore, A., Von Meijenfeldt, F.A.B., Schouten, S., Sinninghe Damsté, J.S., 2025. Substantial contribution of in-situ produced bacterial lipids to the sedimentary lipidome. ISME Communications 5, 1. doi: 10.1101/2025.02.27.640310
2. Ding, S*., Grossi, V., Hopmans, E.C., Bale, N.J., Cravo-Laureau, C., Sinninghe Damsté, J.S., 2024. Nitrogen and sulfur for phosphorus: Lipidome adaptation of anaerobic sulfate-reducing bacteria in phosphorus-deprived conditions. Proceedings of the National Academy of Sciences 121, e2400711121. doi:10.1073/pnas.2400711121
3. Ding, S.*, Hamm, J.N.*, Bale, N.J., Sinninghe Damsté, J.S., Spang, A., 2024. Selective lipid recruitment by an archaeal DPANN symbiont from its host. Nature Communications 15, 3405. doi:10.1038/s41467-024-47750-2
4. Ding, S.*, Von Meijenfeldt, F.A.B.*, Bale, N.J., Sinninghe Damsté, J.S., Villanueva, L., 2024. Production of structurally diverse sphingolipids by anaerobic marine bacteria in the euxinic Black Sea water column. The ISME Journal 153. doi:10.1093/ismejo/wrae153
5. Ding, S.*, Henkel, J.V., Hopmans, E.C., Bale, N.J., Koenen, M., Villanueva, L., Sinninghe Damsté, J.S., 2022. Changes in the membrane lipid composition of a Sulfurimonas species depend on the electron acceptor used for sulfur oxidation. ISME Communications 2, 121. doi:10.1038/s43705-022-00207-3
6. Ding, S.*, Bale, N.J., Hopmans, E.C., Villanueva, L., Arts, M.G.I., Schouten, S., Sinninghe Damsté, J.S., 2021. Lipidomics of environmental microbial communities. II: Characterization using molecular networking and Information Theory. Frontiers in Microbiology 12, 659315. doi:10.3389/fmicb.2021.659315
7. Ding, S.*, Lange, M., Lipp, J., Schwab, V.F., Chowdhury, S., Pollierer, M.M., Krause, K., Li, D., Kothe, E., Scheu, S., Welti, R., Hinrichs, K.-U., Gleixner, G., 2020. Characteristics and origin of intact polar lipids in soil organic matter. Soil Biology and Biochemistry 151, 108045. doi:10.1016/j.soilbio.2020.108045
8. Ding, S., Kohlhepp, B., Trumbore, S., Küsel, K., Totsche, K.-U., Pohnert, G., Gleixner, G., Schwab, V.F., 2018. In situ production of core and intact bacterial and archaeal tetraether lipids in groundwater. Organic Geochemistry 126, 1–12. doi:10.1016/j.orggeochem.2018.10.005
9. Ding, S., Schwab, V.F., Ueberschaar, N., Roth, V.-N., Lange, M., Xu, Y., Gleixner, G., Pohnert, G., 2016. Identification of novel 7-methyl and cyclopentanyl branched glycerol dialkyl glycerol tetraethers in lake sediments. Organic Geochemistry 102, 52–58. doi:10.1016/j.orggeochem.2016.09.009
10. Ding, S., Xu, Y., Wang, Y., He, Y., Hou, J., Chen, L., He, J.-S., 2015. Distribution of branched glycerol dialkyl glycerol tetraethers in surface soils of the Qinghai–Tibetan Plateau: implications of brGDGTs-based proxies in cold and dry regions. Biogeosciences 12, 3141–3151. doi:10.5194/bg-12-3141-2015
11. Ding, S., Xu, Y., Wang, Y., Zhang, X., Zhao, L., Ruan, J., Wu, W., 2014. Spatial and Temporal Variability of Polycyclic Aromatic Hydrocarbons in Sediments from Yellow River-Dominated Margin. The Scientific World Journal 2014, 1–9. doi:10.1155/2014/654183
合作论文：
1. Zheng, F., Yao, W., He, W., Zhang, W., Chen, Y., Chen, H., Zeng, Z., Liu, X.-L., Ding, S., Zheng, Y., Huang, L., Zhu, Y., Zhang, C., 2025. A comprehensive database for high-throughput identification of archaeal lipids using high-resolution mass spectrometry. Nature Communications. doi:10.1038/s41467-025-67286-3
2. Bale, N.J., Koenen, M., Ding, S., Sinninghe Damsté, J.S., 2025. N-Glyceroyl Alkylamine Phosphoglycolipids Dominate the Lipidome of Several Bacillota Bacteria. Systematic and Applied Microbiology 48, 126609. doi:10.2139/ssrn.5157985
3. Dittmann, G., Ding, S., Hopmans, E.C., Schröter, S.A., Orme, A.M., Kothe, E., Lange, M., Gleixner, G., 2025. Bioavailable carbon additions to soil promote free-living nitrogen fixation and microbial biomass growth with N-free lipids. Soil Biology and Biochemistry, 203, 109748. doi:10.1016/j.soilbio.2025.109748
4. Zuffa, S., Schmid, R., Bauermeister, A., P. Gomes, …, Ding, S., Dorrestein, P.C., 2024. microbeMASST: a taxonomically informed mass spectrometry search tool for microbial metabolomics data. Nature Microbiology 9, 336–345. doi:10.1038/s41564-023-01575-9
5. Zhang, X., Wang, Y., Wang, Z., Zhao, M., Fang, Y., Ding, S., Xiao, W., Yu, C., Wang, X., Xu, Y., 2024. Heterogenous distribution and burial flux of black carbon in Chinese lakes and its global implication. Science of The Total Environment 906, 167687. doi:10.1016/j.scitotenv.2023.167687
6. Bale, N.J., Ding, S., Hopmans, E.C., Arts, M.G.I., Villanueva, L., Boschman, C., Haas, A.F., Schouten, S., Sinninghe Damsté, J.S., 2021. Lipidomics of environmental microbial communities. I: Visualization of component distributions using untargeted analysis of high-resolution mass spectrometry data. Frontiers in Microbiology 12, 659302. doi:10.3389/fmicb.2021.659302
7. Ruan, J., Xu, Y., Ding, S., Wang, Y., Zhang, X., 2017. A biomarker record of temperature and phytoplankton community structure in the Okinawa Trough since the last glacial maximum. Quaternary Research 88, 89–97. doi:10.1017/qua.2017.28
8. Ruan, J., Xu, Y., Ding, S., Wang, Y., Zhang, X., 2015. A high resolution record of sea surface temperature in southern Okinawa Trough for the past 15,000 years. Palaeogeography, Palaeoclimatology, Palaeoecology 426, 209–215. doi:10.1016/j.palaeo.2015.03.007
9. Zhang, X., Xu, Y., Ruan, J., Ding, S., Huang, X., 2014. Origin, distribution and environmental significance of perylene in Okinawa Trough since last glaciation maximum. Organic Geochemistry 76, 288–294. doi:10.1016/j.orggeochem.2014.09.008
10. Wu, W., Ruan, J., Ding, S., Zhao, L., Xu, Y., Yang, H., Ding, W., Pei, Y., 2014. Source and distribution of glycerol dialkyl glycerol tetraethers along lower Yellow River-estuary–coast transect. Marine Chemistry 158, 17–26. doi:10.1016/j.marchem.2013.11.006
重要会议报告
2025 Ding, S., Bale, N.J., Cutmore, A., Hopmans, E.C., Von Meijenfeldt, F.A.B., Schouten, S., Sinninghe Damsté, J.S. Substantial contribution of in-situ produced bacterial lipids to the sedimentary lipidome. 32th International Meeting on Organic Geochemistry, Porto, Portugal. Plenary talk (大会报告)
2023 Ding, S., Von Meijenfeldt, F.A.B., Bale, N.J., Sinninghe Damsté, J.S., Villanueva, L. Coupled metalipidomics -metagenomics reveal structurally diverse sphingolipids produced by a wide variety of marine bacteria. 31th International Meeting on Organic Geochemistry, Montpellier, France. Plenary talk (大会报告)
2022 Ding, S., Grossi, V., Hopmans, E.C., Bale, N.J., Cravo-Laureau, C., Sinninghe Damsté, J.S. Changes of the lipidome composition in complex natural environments and pure cultures. 2022 Organic Geochemistry Gordon Research Conference, Holderness, NH, United States. (特邀报告)
2021 Ding, S., Bale, N.J., Hopmans, E.C., Villanueva, L., Arts, M.G.I., Schouten, S., Sinninghe Damsté, J.S. Omics of Environmental Microbial Communities. 30th International Meeting on Organic Geochemistry, Online. (大会报告)
2021 Ding, S., Bale, N.J., Hopmans, E.C., Villanueva, L., Arts, M.G.I., Schouten, S., Sinninghe Damsté, J.S. Lipidomics of Environmental Microbial Communities. Goldschmidt Conference, Lyon, France. (特邀报告)
2021 Ding, S., Bale, N.J., Hopmans, E.C., Villanueva, L., Arts, M.G.I., Schouten, S., Sinninghe Damsté, J.S. The microbial sulfur cycle driven by 1-deoxyceramide producing bacteria. the ' BioGeo -Colloquium' of the CRC 1076 AquaDiva. Jena, Germany. (特邀报告)
主要教育教学和人才培养情况
2020-至今 博士生Georg Dittmann （MPI-BGC）及Franz Kerschhofer （ETH）外导
2018 The Analytical Techniques in the field of biogeochemistry，课程主讲人之一 (12 名博士). 课程主要负责人: Gerd Gleixner和Georg Pohnert
2018 The Paleoclimate 实验课讲解员(12名硕士生). 课程主要负责人: Gerd Gleixner
2017 The Stable Environmental Isotopes，课程助教 (12 名博士). 课程主要负责人: Gerd Gleixner
个人学术主页：
常年招收优秀本科生，研究生，博士后。欢迎感兴趣的同学联系
教育经历
[1] 2015.8-2019.7
德国马普生物地球化学研究所 | 生物地球化学 | 哲学博士学位 | 博士研究生毕业
[2] 2012.9-2015.7
北京大学 | 第四纪地质学 | 理学硕士学位 | 硕士研究生毕业
[3] 2006.9-2010.7
昆明理工大学 | 应用化学 | 理学学士学位 | 大学本科毕业
工作经历
[1] 2026.1-至今
中国地质大学（武汉）
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生物地质与环境地质国家重点实验室
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长聘教授
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在职
[2] 2019.12-2025.12
荷兰皇家海洋研究所
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博士后研究员
[3] 2019.8-2019.11
德国马克斯普朗克生物地球化学研究所
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博士后研究员
曾获荣誉
[1] 国家级海外人才项目2026
[2] 湖北省BR2026
其他联系方式
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